Resume
Experience
2021 - current
University of PaviaAssociate Professor of Bioinformatics
I am leading a lab of Computational Genomics, at the Department of Biology and Biotechnology. My lab is focused on developing methods and open-source bioinformatics pipelines to unmask and better understand patterns of genomic variation associated with complex phenotypes.
2019 - 2020
Medicines and Healthcare Regulatory Agency, NIBSCSection Leader, Head of Bioinformatics
I led the bioinformatics team responsible for the analysis of the Institute’s next generation sequencing data. This includes support and coordination of genomics and statistical analysis projects, in a wide range of areas spanning from Human genetics to immunology, microbiology and metagenomics. I contributed to the planning and development of biocomputing facilities, both on premises and on the cloud, and I represented the institute externally with the relevant stakeholders.
2017 - 2019
QIAGEN BioinformaticsSenior Scientist, Biomedical Genomics
I was part of the Global Product Management team for the CLC Genomics Workbench and Genomics Server; I was responsible for the development of scientific content related to QIAGEN bioinformatics portfolio in the biomedical sector, and for leading scientific collaborations with other institutions and key opinion leaders.
2013 - 2018
Department of Biomedicine, Aarhus UniversityAssociate Professor, Human Genomics and Bioinformatics
My work has been focused on large-scale data analysis of next generation sequencing in psychiatric disorders (schizophrenia, depression, bipolar disorder, autism).
I have been responsible of the development of data analysis pipelines for genome sequences of large cohorts of patients and healthy individuals, and for the deployment of the analyses on different high performance computing infrastructures.
2011 - 2013
University College London, Institute of Child HealthSenior Research Associate in Genome Analysis
Leader of Bioinformatics at the Centre for Translational Genomics “GOSgene". Leader of the NGS Consortium at the University High Performance Computing cluster “Legion”.
2010 - 2011
University College London, Division of Research StrategyResearch Associate in Genome Analysis
Development of the analysis pipeline for exome sequencing, SNPs and INDELs calling, annotation and statistics.
As part of UCL Genomics, I have collaborated with several research groups to provide the expertise in statistical and bioinformatic analysis of NGS data. I have participated to the Wellcome Trust Case Control Consortium for the analysis of one of the WTCC2 genome-wide association studies.
Education
2002 - 2006
University of BolognaPh.D. in Experimental Pathology
PhD thesis entitled: Genetic determinants of human longevity: hypothesis-driven investigation through new technologies.
Supervisor: Prof. Claudio Franceschi
External reviewers: Professor Eline Slagboom (NL) and Professor Stefan Schreiber (D)
2006
European Association of Higher Education in Biotechnology, EdinburghEuropean Doctorate in Biotechnology (EDBT)
1995 - 2000
Faculty of Medicine, University of BolognaLaurea in Medical Biotechnology
First class honours, cum laude.
Thesis in Immunology II, on "Genetic Risk Factors in Alzheimer’s Disease: studies on polymorphisms of interleukin 6 gene".
1990 - 1995
Liceo Scientifico G. Marconi, GrossetoScientific School Leaving Certificate
School Diploma with score of 60/60
Policy and Communities
2018 - 2021
Regional Government, Regione Lombardia, ItalyMember, Regional Forum for Research and Innovation
The Forum is an advisory body to the Regional Government on Research and Innovation policies.
As member, I am contributing in particular on the topics of Genomics, large scale data analysis and computing, population-scale screening and how the concept of “responsible research and innovation” applies to public policies on these subjects, especially when involving industry.
2009 - 2018
Association of the Italian Biotechnologists (ANBI)President, Collegio dei Probiviri
Chair of the body regulating the code of conduct and bioethics for the national Association.
2007 - 2018
European Federation of Biotechnologists (EFB)Executive Board Member
2016 - 2017
European Commission, BrusselsRapporteur, Expert Group on Revision of the Bieconomy Strategy
2011
European Commission, DG Research and Innovation, BrusselsMember of the Advisory Committee on Skills for Bioeconomy 2020
2007 - 2009
Young European Biotech NetworkChairman
2001 - 2007
Association of the Italian Biotechnologists (ANBI)President
2005 - 2007
Committee for Biotechnology and Biosafety, Presidency of the Council of Ministers, RomeMember, Expert Group on Education
2018 - Current
Regional Government, Regione Lombardia, ItalyMember, Regional Forum for Research and Innovation
The Forum is an advisory body to the Regional Government on Research and Innovation policies.
As member, I am contributing in particular on the topics of Genomics, large scale data analysis and computing, population-scale screening and how the concept of “responsible research and innovation” applies to public policies on these subjects, especially when involving industry.